MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Mycobacterium gilvum PYR-GCK plasmid pMFLV02

Total Repeats: 138

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009340	CGA	2	6	87	92	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2	NC_009340	AG	3	6	127	132	50 %	0 %	50 %	0 %	Non-Coding
3	NC_009340	GTG	2	6	175	180	0 %	33.33 %	66.67 %	0 %	Non-Coding
4	NC_009340	GCT	2	6	195	200	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_009340	CCA	2	6	231	236	33.33 %	0 %	0 %	66.67 %	Non-Coding
6	NC_009340	CGCA	2	8	239	246	25 %	0 %	25 %	50 %	Non-Coding
7	NC_009340	AGGA	2	8	264	271	50 %	0 %	50 %	0 %	Non-Coding
8	NC_009340	AGG	2	6	282	287	33.33 %	0 %	66.67 %	0 %	Non-Coding
9	NC_009340	GGT	2	6	312	317	0 %	33.33 %	66.67 %	0 %	Non-Coding
10	NC_009340	GC	3	6	343	348	0 %	0 %	50 %	50 %	Non-Coding
11	NC_009340	TCG	2	6	403	408	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_009340	GCC	2	6	411	416	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_009340	GAGC	2	8	428	435	25 %	0 %	50 %	25 %	Non-Coding
14	NC_009340	CG	3	6	879	884	0 %	0 %	50 %	50 %	Non-Coding
15	NC_009340	ACG	2	6	898	903	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_009340	GTCGA	2	10	932	941	20 %	20 %	40 %	20 %	Non-Coding
17	NC_009340	CTG	3	9	2381	2389	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_009340	GC	3	6	2396	2401	0 %	0 %	50 %	50 %	Non-Coding
19	NC_009340	CCG	2	6	2405	2410	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_009340	CGG	3	9	2414	2422	0 %	0 %	66.67 %	33.33 %	Non-Coding
21	NC_009340	GCC	2	6	2427	2432	0 %	0 %	33.33 %	66.67 %	Non-Coding
22	NC_009340	AGC	2	6	2477	2482	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_009340	CGA	2	6	2653	2658	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_009340	GGC	2	6	2674	2679	0 %	0 %	66.67 %	33.33 %	Non-Coding
25	NC_009340	T	6	6	2703	2708	0 %	100 %	0 %	0 %	Non-Coding
26	NC_009340	CGA	2	6	2792	2797	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
27	NC_009340	ACC	2	6	2817	2822	33.33 %	0 %	0 %	66.67 %	Non-Coding
28	NC_009340	CG	3	6	2823	2828	0 %	0 %	50 %	50 %	Non-Coding
29	NC_009340	ATC	2	6	2863	2868	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_009340	CGC	2	6	2939	2944	0 %	0 %	33.33 %	66.67 %	Non-Coding
31	NC_009340	CT	3	6	2960	2965	0 %	50 %	0 %	50 %	Non-Coding
32	NC_009340	CAG	2	6	3173	3178	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_009340	CTCACC	2	12	3200	3211	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
34	NC_009340	GCC	2	6	3266	3271	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_009340	CGCCT	2	10	3298	3307	0 %	20 %	20 %	60 %	Non-Coding
36	NC_009340	ACG	2	6	3336	3341	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_009340	GC	3	6	3384	3389	0 %	0 %	50 %	50 %	Non-Coding
38	NC_009340	GCC	2	6	3400	3405	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_009340	GGC	3	9	3407	3415	0 %	0 %	66.67 %	33.33 %	Non-Coding
40	NC_009340	TGG	2	6	3439	3444	0 %	33.33 %	66.67 %	0 %	Non-Coding
41	NC_009340	CCG	2	6	8353	8358	0 %	0 %	33.33 %	66.67 %	Non-Coding
42	NC_009340	CCG	2	6	8360	8365	0 %	0 %	33.33 %	66.67 %	Non-Coding
43	NC_009340	CATCGG	2	12	8382	8393	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
44	NC_009340	GGTG	2	8	8427	8434	0 %	25 %	75 %	0 %	Non-Coding
45	NC_009340	CGC	2	6	8534	8539	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_009340	GTG	2	6	8588	8593	0 %	33.33 %	66.67 %	0 %	Non-Coding
47	NC_009340	GCG	2	6	8636	8641	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_009340	CGTC	2	8	8660	8667	0 %	25 %	25 %	50 %	Non-Coding
49	NC_009340	CCG	2	6	8671	8676	0 %	0 %	33.33 %	66.67 %	Non-Coding
50	NC_009340	TTG	2	6	8691	8696	0 %	66.67 %	33.33 %	0 %	Non-Coding
51	NC_009340	CGC	2	6	8723	8728	0 %	0 %	33.33 %	66.67 %	Non-Coding
52	NC_009340	GGC	2	6	8763	8768	0 %	0 %	66.67 %	33.33 %	Non-Coding
53	NC_009340	CGG	4	12	8816	8827	0 %	0 %	66.67 %	33.33 %	Non-Coding
54	NC_009340	TGA	2	6	8831	8836	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_009340	TGC	2	6	8859	8864	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_009340	CGC	2	6	8865	8870	0 %	0 %	33.33 %	66.67 %	Non-Coding
57	NC_009340	GAT	2	6	8887	8892	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_009340	GCT	2	6	8893	8898	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
59	NC_009340	TTG	2	6	8907	8912	0 %	66.67 %	33.33 %	0 %	Non-Coding
60	NC_009340	TTC	2	6	8928	8933	0 %	66.67 %	0 %	33.33 %	Non-Coding
61	NC_009340	TCAGC	2	10	8981	8990	20 %	20 %	20 %	40 %	Non-Coding
62	NC_009340	GATT	2	8	9031	9038	25 %	50 %	25 %	0 %	Non-Coding
63	NC_009340	CTGT	2	8	9044	9051	0 %	50 %	25 %	25 %	Non-Coding
64	NC_009340	TCA	2	6	9115	9120	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_009340	T	6	6	9164	9169	0 %	100 %	0 %	0 %	Non-Coding
66	NC_009340	CCAG	2	8	9191	9198	25 %	0 %	25 %	50 %	Non-Coding
67	NC_009340	CGT	2	6	9934	9939	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
68	NC_009340	AGCA	2	8	10354	10361	50 %	0 %	25 %	25 %	Non-Coding
69	NC_009340	CGC	3	9	10412	10420	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_009340	CGA	2	6	10430	10435	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
71	NC_009340	AGA	2	6	10444	10449	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_009340	CAC	2	6	10500	10505	33.33 %	0 %	0 %	66.67 %	Non-Coding
73	NC_009340	CGG	2	6	11269	11274	0 %	0 %	66.67 %	33.33 %	Non-Coding
74	NC_009340	GC	3	6	11348	11353	0 %	0 %	50 %	50 %	Non-Coding
75	NC_009340	GAA	2	6	11373	11378	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_009340	AGT	2	6	11383	11388	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_009340	GAC	2	6	11391	11396	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
78	NC_009340	TGA	2	6	11418	11423	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
79	NC_009340	GGCC	2	8	11438	11445	0 %	0 %	50 %	50 %	Non-Coding
80	NC_009340	CT	3	6	11457	11462	0 %	50 %	0 %	50 %	Non-Coding
81	NC_009340	GCT	2	6	11472	11477	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
82	NC_009340	C	7	7	12697	12703	0 %	0 %	0 %	100 %	Non-Coding
83	NC_009340	TGA	2	6	12710	12715	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
84	NC_009340	C	6	6	12719	12724	0 %	0 %	0 %	100 %	Non-Coding
85	NC_009340	TCG	2	6	12875	12880	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_009340	GAGCC	2	10	12889	12898	20 %	0 %	40 %	40 %	Non-Coding
87	NC_009340	ACCCAC	2	12	15811	15822	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_009340	AGG	2	6	15905	15910	33.33 %	0 %	66.67 %	0 %	Non-Coding
89	NC_009340	TTG	3	9	16534	16542	0 %	66.67 %	33.33 %	0 %	Non-Coding
90	NC_009340	GCG	2	6	16600	16605	0 %	0 %	66.67 %	33.33 %	Non-Coding
91	NC_009340	TGCC	2	8	17432	17439	0 %	25 %	25 %	50 %	Non-Coding
92	NC_009340	TCGT	2	8	17487	17494	0 %	50 %	25 %	25 %	Non-Coding
93	NC_009340	CAT	2	6	17495	17500	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_009340	GTG	2	6	18080	18085	0 %	33.33 %	66.67 %	0 %	Non-Coding
95	NC_009340	CGA	2	6	18093	18098	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
96	NC_009340	GCA	2	6	18138	18143	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
97	NC_009340	CAT	2	6	18152	18157	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_009340	CGT	2	6	19039	19044	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
99	NC_009340	GC	3	6	19062	19067	0 %	0 %	50 %	50 %	Non-Coding
100	NC_009340	CAA	2	6	19219	19224	66.67 %	0 %	0 %	33.33 %	Non-Coding
101	NC_009340	CG	3	6	19235	19240	0 %	0 %	50 %	50 %	Non-Coding
102	NC_009340	GCCA	2	8	19789	19796	25 %	0 %	25 %	50 %	Non-Coding
103	NC_009340	TGT	2	6	19801	19806	0 %	66.67 %	33.33 %	0 %	Non-Coding
104	NC_009340	TGG	2	6	19910	19915	0 %	33.33 %	66.67 %	0 %	Non-Coding
105	NC_009340	GGAC	2	8	19916	19923	25 %	0 %	50 %	25 %	Non-Coding
106	NC_009340	TGG	2	6	19931	19936	0 %	33.33 %	66.67 %	0 %	Non-Coding
107	NC_009340	GCCCG	2	10	20258	20267	0 %	0 %	40 %	60 %	Non-Coding
108	NC_009340	CTA	2	6	20327	20332	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
109	NC_009340	GCC	2	6	20342	20347	0 %	0 %	33.33 %	66.67 %	Non-Coding
110	NC_009340	AGC	2	6	21592	21597	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
111	NC_009340	CGT	2	6	21627	21632	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
112	NC_009340	CTG	2	6	21678	21683	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
113	NC_009340	CTT	2	6	21684	21689	0 %	66.67 %	0 %	33.33 %	Non-Coding
114	NC_009340	TCC	2	6	23099	23104	0 %	33.33 %	0 %	66.67 %	Non-Coding
115	NC_009340	CTG	2	6	23170	23175	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
116	NC_009340	ACAA	2	8	24035	24042	75 %	0 %	0 %	25 %	Non-Coding
117	NC_009340	C	6	6	24048	24053	0 %	0 %	0 %	100 %	Non-Coding
118	NC_009340	CTT	2	6	24068	24073	0 %	66.67 %	0 %	33.33 %	Non-Coding
119	NC_009340	GTT	2	6	24120	24125	0 %	66.67 %	33.33 %	0 %	Non-Coding
120	NC_009340	ATT	2	6	24144	24149	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_009340	ACG	2	6	24169	24174	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
122	NC_009340	AAC	2	6	24176	24181	66.67 %	0 %	0 %	33.33 %	Non-Coding
123	NC_009340	GCCA	2	8	24213	24220	25 %	0 %	25 %	50 %	Non-Coding
124	NC_009340	CTGC	2	8	24274	24281	0 %	25 %	25 %	50 %	Non-Coding
125	NC_009340	ACGG	2	8	24290	24297	25 %	0 %	50 %	25 %	Non-Coding
126	NC_009340	CGG	2	6	24358	24363	0 %	0 %	66.67 %	33.33 %	Non-Coding
127	NC_009340	GGC	2	6	24392	24397	0 %	0 %	66.67 %	33.33 %	Non-Coding
128	NC_009340	AAC	2	6	25017	25022	66.67 %	0 %	0 %	33.33 %	Non-Coding
129	NC_009340	AAC	2	6	25041	25046	66.67 %	0 %	0 %	33.33 %	Non-Coding
130	NC_009340	CCAG	2	8	25120	25127	25 %	0 %	25 %	50 %	Non-Coding
131	NC_009340	GAA	2	6	25139	25144	66.67 %	0 %	33.33 %	0 %	Non-Coding
132	NC_009340	GCG	2	6	25167	25172	0 %	0 %	66.67 %	33.33 %	Non-Coding
133	NC_009340	GGC	2	6	25226	25231	0 %	0 %	66.67 %	33.33 %	Non-Coding
134	NC_009340	ACG	2	6	25242	25247	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
135	NC_009340	TGC	2	6	25249	25254	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
136	NC_009340	CAG	2	6	25262	25267	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
137	NC_009340	CGG	2	6	25268	25273	0 %	0 %	66.67 %	33.33 %	Non-Coding
138	NC_009340	CTT	2	6	25280	25285	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.